GCC Code Coverage Report

Directory: gridformat/
File: gridformat/vtk/vtp_reader.hpp
Date: 2024-11-10 16:24:00
Exec Total Coverage
Lines: 63 68 92.6%
Functions: 13 13 100.0%
Branches: 50 102 49.0%
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1 // SPDX-FileCopyrightText: 2022-2023 Dennis Gläser <dennis.glaeser@iws.uni-stuttgart.de>
2 // SPDX-License-Identifier: MIT
3 /*!
4 * \file
5 * \ingroup VTK
6 * \copydoc GridFormat::VTPReader
7 */
8 #ifndef GRIDFORMAT_VTK_VTP_READER_HPP_
9 #define GRIDFORMAT_VTK_VTP_READER_HPP_
10
11 #include <string>
12 #include <optional>
13 #include <iterator>
14 #include <utility>
15
16 #include <gridformat/common/string_conversion.hpp>
17 #include <gridformat/common/exceptions.hpp>
18 #include <gridformat/common/field.hpp>
19
20 #include <gridformat/grid/cell_type.hpp>
21 #include <gridformat/grid/reader.hpp>
22 #include <gridformat/vtk/xml.hpp>
23
24 namespace GridFormat {
25
26 /*!
27 * \ingroup VTK
28 * \brief Reader for .vtp file format
29 */
30 class VTPReader : public GridReader {
31 private:
32 231 void _open(const std::string& filename, typename GridReader::FieldNames& fields) override {
33
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 231 auto helper = VTK::XMLReaderHelper::make_from(filename, "PolyData");
34
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 231 _num_points = from_string<std::size_t>(helper.get("PolyData/Piece").get_attribute("NumberOfPoints"));
36
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 231 _num_verts = helper.get("PolyData/Piece").get_attribute_or(std::size_t{0}, "NumberOfVerts");
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 231 _num_lines = helper.get("PolyData/Piece").get_attribute_or(std::size_t{0}, "NumberOfLines");
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 231 _num_strips = helper.get("PolyData/Piece").get_attribute_or(std::size_t{0}, "NumberOfStrips");
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 231 _num_polys = helper.get("PolyData/Piece").get_attribute_or(std::size_t{0}, "NumberOfPolys");
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41
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 231 if (_num_strips > 0)
42 ✗ throw NotImplemented("Triangle strips are not (yet) supported");
43
44
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 231 VTK::XMLDetail::copy_field_names_from(helper.get("PolyData"), fields);
45 231 _helper.emplace(std::move(helper));
46 231 }
47
48 43 void _close() override {
49 43 _helper.reset();
50 43 _num_points = 0;
51 43 _num_verts = 0;
52 43 _num_lines = 0;
53 43 _num_strips = 0;
54 43 _num_polys = 0;
55 43 }
56
57 1 std::string _name() const override {
58
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 2 return "VTPReader";
59 }
60
61 889 std::size_t _number_of_cells() const override {
62 889 return _num_verts + _num_lines + _num_strips + _num_polys;
63 }
64
65 1289 std::size_t _number_of_points() const override {
66 1289 return _num_points;
67 }
68
69 7 std::size_t _number_of_pieces() const override {
70 7 return 1;
71 }
72
73 85 bool _is_sequence() const override {
74 85 return false;
75 }
76
77 161 FieldPtr _points() const override {
78
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 161 return _helper.value().make_points_field("PolyData/Piece/Points", _number_of_points());
79 }
80
81 269 void _visit_cells(const typename GridReader::CellVisitor& visitor) const override {
82
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 269 if (_num_verts > 0)
83 ✗ _visit_cells("Verts", CellType::vertex, _num_verts, visitor);
84
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 269 if (_num_lines > 0)
85 ✗ _visit_cells("Lines", CellType::segment, _num_lines, visitor);
86
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 269 if (_num_polys > 0)
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 269 _visit_cells("Polys", CellType::polygon, _num_polys, visitor);
88 269 }
89
90 631 FieldPtr _cell_field(std::string_view name) const override {
91
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 631 return _helper.value().make_data_array_field(name, "PolyData/Piece/CellData", _number_of_cells());
92 }
93
94 634 FieldPtr _point_field(std::string_view name) const override {
95
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 634 return _helper.value().make_data_array_field(name, "PolyData/Piece/PointData", _number_of_points());
96 }
97
98 54 FieldPtr _meta_data_field(std::string_view name) const override {
99
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 54 return _helper.value().make_data_array_field(name, "PolyData/FieldData");
100 }
101
102 269 void _visit_cells(std::string_view type_name,
103 const CellType& cell_type,
104 const std::size_t expected_size,
105 const typename GridReader::CellVisitor& visitor) const {
106
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 269 const std::string path = "PolyData/Piece/" + std::string{type_name};
107
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 538 const auto offsets = _helper.value().make_data_array_field(
108 "offsets", path, expected_size
109
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 269 )->template export_to<std::vector<std::size_t>>();
110
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 538 const auto connectivity = _helper.value().make_data_array_field(
111 "connectivity", path
112
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 269 )->template export_to<std::vector<std::size_t>>();
113
114 269 std::vector<std::size_t> corners;
115
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 6401 for (std::size_t i = 0; i < expected_size; ++i) {
116 6132 corners.clear();
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 6132 const std::size_t offset_begin = (i == 0 ? 0 : offsets.at(i-1));
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 6132 const std::size_t offset_end = offsets.at(i);
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 6132 if (connectivity.size() < offset_end)
120 ✗ throw SizeError("Connectivity array read from the file is too small");
121
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 6132 if (offset_end < offset_begin)
122 ✗ throw ValueError("Invalid offset array");
123
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 6132 std::copy_n(connectivity.begin() + offset_begin, offset_end - offset_begin, std::back_inserter(corners));
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125
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 12264 const CellType ct = cell_type == CellType::polygon ? (
126
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 12263 corners.size() == 3 ? CellType::triangle
127
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 6131 : (corners.size() == 4 ? CellType::quadrilateral : cell_type)
128 6132 ) : cell_type;
129
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 6132 visitor(ct, corners);
130 }
131 269 }
132
133 std::optional<VTK::XMLReaderHelper> _helper;
134 std::size_t _num_points;
135 std::size_t _num_verts;
136 std::size_t _num_lines;
137 std::size_t _num_strips;
138 std::size_t _num_polys;
139 };
140
141 } // namespace GridFormat
142
143 #endif // GRIDFORMAT_VTK_VTP_READER_HPP_
144